Showing results for: [ transcriptomics ]
Genome, annotation and raw data for publication titled: "Genomic changes associated with adaptation to arid environments in cactophilic Drosophila species "
Legacy data - - Published 12 Dec 2018
Legacy data - - Published 02 Nov 2018
The aim of the project was to generate a high-quality reference transcriptome for Murray-Darling rainbowfish to enable the design of genome-wide expression analysis strategies (such as microarrays) an... mored to obtain protein-coding sequences for nuclear receptors and steroid biosynthetic enzymes involved in sexual development and reproduction. Assembled transcripts, predicted coding regions, deduced proteins and tentative descriptions are available in this collection.less
CLSD-Molecular biomarkers in rainbow - RNA-Seq - Published 06 Nov 2015
The DEW pipeline is a one command line solution that aligns reads, corrects expression biases (eXpress), TMM normalizes (edgeR) and produces FPKM values that are then visualized with pretty ggplot gra... morephics.
This BZ2-compressed tar archive provides the software and licensing statements. DEW is written in Perl and requires a SQLite database and is supported for Linux 64-bit computers. The homepage of the software can be found at http://dew.sourceforge.net.less
Cont to TCP01 Dissecting Adaptive - transcriptomics software development - Published 06 Jan 2015