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Cowpea genome and transcriptome data resource
Assembled genomic and tissue-specific transcriptomic data resources for two genetically distinct lines of Cowpea (Vigna unguiculata (L.) Walp). For each of two varieties of cowpea (IT97K-499-35, IT86D-1010) this collections contains the following datasets :
i) genomic survey assemblies based on Illumina sequencing
ii) transcriptome assemblies
iii)... more raw DNA and RNA sequence data feeding into the above assemblies
iv) In-silico gene predictions and predicted gene sequences derived from IT86D-1010 and IT97K-499-35
v) Mapping to the Vigna unguiculata v1.0 reference genome (http://phytozome.jgi.doe.gov/)
Plant Developmental and Reproductive Biology
male and female gametogenesis
This data was generated and analysed as part of the Capturing Heterosis for Smallholders project funded by the Bill and Melinda Gates Foundation, Project Leader: Anna Koltunow, CSIRO.
This resource references the early release reference genome for IT97K-499-35 (Vigna unguiculata v1.0, NSF, UCR, USAID, DOE-JGI, http://phytozome.jgi.doe.gov/)
Creative Commons Attribution 4.0 International Licence
Spriggs, Andrew; Henderson, Steven; Taylor, Jen; Koltunow, Anna (2017): Cowpea genome and transcriptome data resource. v3. CSIRO. Data Collection.
All Rights (including copyright) CSIRO 2017.
The metadata and files (if any) are available to the public.
Capturing Heterosis for Smallholders, OPP1076280
The project aims to develop tools to generate self-reproducing sorghum and cowpea hybrids from which seeds can be saved and grown by smallholder farmers without loss of yield of quality.
Genome sequences - raw and assembled, relating to a crop plant species.
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