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GWAS mouse data for Eagle paper

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About this Collection

GWAS mouse data for Eagle paper


The files used in the real data analyses of the paper entitled "Eagle: Making multiple-locus association mapping on a genome-wide scale routine". The original data comes from Nicod et al. (2016) Nature Genetics who collected SNP dosages (continuous scores from 0 to1). We transformed these dosages into SNP genotypes (0,1,2). Input files... more


Genetics not elsewhere classified Genomics Statistics not elsewhere classified


https://doi.org/10.25919/5bc08287717dd


2018


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CSIROEnquiries@csiro.au
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outbred mouse GWAS genome-wide Eagle multiple-locus association mapping


:

Outbred Mice Data


The original data was obtained from the Heterogeneous Stock Mouse web site at http://wp.cs.ucl.ac.uk/outbredmice/heterogeneous-stock-mice/. The data required further processing by R scripts to convert the SNP dosages into SNP genotypes.


The Eagle input files were created by Andrew George. The original data was generated by or with the assistance of: Jerome Nicod, Robert Davies, Na Cai, Carl Hassett, Leo Goodstadt, Cormac Cosgrove, Benjamin K Yee, Vikte Lionikaite, Rebecca E McIntyre, Carol Ann Remme, Elisabeth M. Lodder, Jennifer S. Gregory, Tertius Hough, Russell Joynson, Hayley Phelps, Barbara Nell, Clare Rowe, Joe Wood, Alison Walling, Nasrin Bopp, Amarjit Bhomra, Polinka Hernandez-Pliego, Jacques Callebert, Richard M. Aspden, Nick P Talbot, Peter A Robbins, Mark Harrison, Martin Fray, Jean-Marie Launay, Yigal M. Pinto, David A. Blizard, Connie R. Bezzina, David J Adams, Paul Franken, Tom Weaver, Sara Wells, Steve DM Brown, Paul K Potter, Paul Klenerman, Arimantas Lionikas, Richard Mott & Jonathan Flint


Creative Commons Attribution 4.0 International Licence


CSIRO (Australia)


George, Andrew (2018): GWAS mouse data for Eagle paper. v2. CSIRO. Data Collection. https://doi.org/10.25919/5bc08287717dd


All Rights (including copyright) CSIRO 2018.


The metadata and files (if any) are available to the public.

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About this Project

Acquired


Development of Statistical Methods


Developing statistical methods for detiding hydrographic data


Analysis


Andrew George


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