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The effect of dissolved copper and nickel on the adult coral Acropora muricata and its microbiome

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About this Collection

The effect of dissolved copper and nickel on the adult coral Acropora muricata and its microbiome


The data describes the microbiome community of the coral Acropora mucricata following exposure to nickel and copper (separately) for 4 days under controlled laboratory conditions


Environmental Sciences not elsewhere classified


https://doi.org/10.25919/5cb58f09621db


01 Jun 2016


30 Sep 2018


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CSIROEnquiries@csiro.au
1300 363 400

Tropical ecotoxicology Coral microbiome DNA metabarcoding 16S rDNA 18S rDNA Metals Coral reefs


Amplicon libraries were prepared for sequencing using TruSeq PCR-free kit. The libraries were run as two separate Illumina® Miseq sequencing runs, 2x 250bp for 16SrDNA and 2x 150bp for 18SrDNA. Sequenced data were processed using a custom pipeline (Greenfield Hybrid Amplicon Pipeline, GHAP) which is based on USEARCH tools (Edgar, 2013). The pipeline is available at https://doi.org/10.4225/08/59f98560eba25.


Collaborators: School of Chemistry, University of Wollongong, School of Environment, Science and Engineering, Southern Cross University, Department of Biological Sciences, Macquarie University, CSIRO Land and Water, CSIRO Energy, North Ryde, National Sea Simulator, Australian Institute of Marine Science, ANSTO.


CSIRO Data Licence


CSIRO (Australia), University of Wollongong (Australia), Southern Cross University (SCU) (Australia), Macquarie University (Australia), Australian Institute of Marine Sciences (Australia), ANSTO (Australia)


Gissi, Francesca; Reichelt-Brushett, Amanda; Chariton, Anthony; Stauber, Jenny; Greenfield, Paul; Humphrey, Craig; Salmon, Mat; Stephenson, Sarah; Creswell, Tom; Jolley, Dianne (2019): The effect of dissolved copper and nickel on the adult coral Acropora muricata and its microbiome. v2. CSIRO. Data Collection. https://doi.org/10.25919/5cb58f09621db


All Rights (including copyright) CSIRO 2019.


The metadata and files (if any) are available to the public.

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About this Project

NiPERA


This project has investigated the toxicity of nickel to tropical marine biota. The data uploaded here presents findings on the effect of nickel to adult corals and their microbiome.


Jenny Stauber


The effect of dissolved copper and nickel on the adult coral Acropora muricata and its microbiome


The effect of dissolved copper and nickel on the adult coral Acropora muricata and its microbiome


Experiment


Francesca Gissi


Amanda Reichelt-Brushett


Anthony Chariton


Jenny Stauber


Paul Greenfield


Craig Humphrey


Mat Salmon


Sarah Stephenson


Tom Creswell


Dianne Jolley


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