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Hieracium Laser Captured Cell Type RNASeq Resource
A collection of raw and analysed sequence resources of three ovule cell types; enlarging aposporous initial cells, early aposporous embryo sacs and somatic ovule cells in apomictic Hieracium praealtum. This collection was generated by the Asexual Seed Formation research team in CSIRO led by Anna Koltunow. This data collection supports the publicati... moreon : Asexual female gametogenesis involves contact with a sexually-fated megaspore in apomictic Hieracium Martina Juranić, Matthew R. Tucker , Carolyn J. Schultz, Neil J. Shirley, Jennifer M. Taylor, Andrew Spriggs, Susan D. Johnson, Vincent Bulone and Anna M.G. Koltunow* Plant Physiology 2018 less
Gene Expression (incl. Microarray and other genome-wide approaches)
Plant Developmental and Reproductive Biology
Detailed methods describing the generation of the resource, the cell types used in the resource and analytical methods are published in this publication and cited references contained within. Generation of the laser captured cell transcriptomes resource, in combination with previously published integrated Hieracium survey genomic and transcriptome resource (Rabiger et al., 2016), enables exploration of transcriptional signatures in aposporous initial cell. Martina Juranić, Matthew R. Tucker , Carolyn J. Schultz, Neil J. Shirley, Jennifer M. Taylor, Andrew Spriggs, Susan D. Johnson, Vincent Bulone and Anna M.G. Koltunow* Plant Physiology 2018
Asexual Seed Formation Team, CSIRO Developed in CSIRO OCE postdoctoral fellowships awarded to and supervised by Anna Koltunow
CSIRO Data Licence
Juranic, Martina; Koltunow, Anna; Johnson, Susan; Spriggs, Andrew; Taylor, Jen (2018): Hieracium Laser Captured Cell Type RNASeq Resource. v1. CSIRO. Data Collection.
All Rights (including copyright) CSIRO 2018.
The metadata and files (if any) are available to the public.
OCE, PDF, KOL014-RAB018, Switching betwe
The development and analysis of a genomic and transcriptome resource for Hieracium, a model for apomixis. This includes the characterisation of small RNA profiles and small RNA pathway members such as Argonautes. As well as single cell transcriptomes.
Development and Characterisation of Hieracium Genomics Resource
Data resource supporting the publication of the generation and analysis of a large genomic and transcriptomic sequence resource for the study of apomixis within the model plant Hieracium. This resource supports the analysis of relevant developmental stages in seed formation and within key genotypes and subspecies of the Hieracium model to provide i... morensights into asexsual seed production in this species. less
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