Click here to view this collection in the new DAP user interface
Hetero version 2.0
A program to simulate the evolution of DNA under the mixture models of heterogeneity across lineage and heterogeneity across sites.
Hetero was written to facilitate the development and testing of phylogenetic methods.
In particular, Hetero 2 allows the user to generate nucleotide sequences on a phylogenetic tree under complex conditions.
The com... moreplexity of the conditions are such that the evolutionary process can differ from site to site in the DNA as well as from edge to edge in the phylogenetic tree, with the evolutionary process being the variable.
The output is a set of alignments of nucleotides.
For further details, see the manual, which is included with the software. less
Hetero 2.0 Software
This software was developed by the bioinformatics and phylogenomics team in Ecosystem Sciences, The Commonwealth Scientific and Industrial Research Organisation (CSIRO), Canberra, Australia.
CSIRO Open Source Software Licence (Based on MIT/BSD Open Source Licence)
Jayaswal, Vivek; Wong, Thomas KF; Robinson, John; Poladian, Leon; Jermiin, Lars (2014): Hetero version 2.0. v1. CSIRO. Software Collection.
All Rights (including copyright) CSIRO 2014.
The metadata and files (if any) are available to the public.
Tested on Linux and MacOS
CLSD Strategic: Solving Biodiversity Cha
We generate knowledge on the mechanistic links and synergistic interactions between landscape change, species invasions and native species resilience in terrestrial ecosystems. Working on both natural and agricultural systems, we undertake research and develop theory to underpin more effective policy and management actions for conservation, invasio... moren and production challenges in the face of rapid global change. less
Bioinformatics software previously made available from the CSIRO ICT and Services website.
Thomas KF Wong
Others were also interested in