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Transcriptome assembly of Chinese tallow (Triadica sebifera)

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About this Collection

Transcriptome assembly of Chinese tallow (Triadica sebifera)


Description of Triadica sebifera trnascripts mapped to Ricinus communis transcript sequences downloaded from Ricinus PlantGDB (http://www.plantgdb.org/RcGDB/)


Gene Expression (incl. Microarray and other genome-wide approaches)


https://doi.org/10.4225/08/552E37202AA20


15 Apr 2015


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Chinese tallow Ricinus comminus transcriptome contigs


CSIRO Data Licence


CSIRO (Australia)


Divi, Uday (2015): Transcriptome assembly of Chinese tallow (Triadica sebifera). v1. CSIRO. Data Collection. https://doi.org/10.4225/08/552E37202AA20


All Rights (including copyright) CSIRO Australia 2015.


The metadata and files (if any) are available to the public.

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About this Project

CLSD EF-RP3 CDF25.1 CESRE TSOP 2013/2014


PROJECT TITLE Understanding tallow tissue development: defining regulatory gene networks for non-seed lipid accumulating tissues. DESCRIPTION Oil in the form of triacylglycerol (TAG) is the major storage compound for fatty acids (FAs) and is the most energy-dense storage form of reduced carbon in many species (Durrett et al., 2008). Unlike most pl... more


Surinder Singh


Annotation and Taxnomic distribution of Chinese tallow (Triadica sebifera) transcriptome


Since Ricinus communis was the most closely related species, we used its annotated transcriptome as a reference to identify Triadica sebifera homologs. A database was generated with the R. communis transcript sequences downloaded from PlantGDB (http://www.plantgdb.org/RcGDB/) and blasted against the T. sebifera transcriptome. The T. sebifera seque... more


Analysis


Uday Divi


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